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There are so many amazing hotels in “America’s finest city” that it becomes a challenge to choose the one for your trip. To make things easier for you, I’ve rounded up some of the best boutique hotels in San Diego. 

Why boutique hotels? Unlike larger chain hotels with virtually no personality, these places offer more personalized and unique experiences. 

I’ve been lucky enough to call this city home for 8 years, so I’m excited to help you find the perfect boutique hotel! 

Psssst: Have a look at this San Diego travel guide for more inspo and insights for your trip.

Disclaimer: This post contains affiliate links. If you purchase through these links, I may make a small commission at no additional cost to you. Thanks for your support!

Best San Diego Hotels

From colorful and eclectic abodes to classic and elegant and everything in between — here are San Diego’s best hotels. 

1. Orli La Jolla

Orli La Jolla is a lovely hotel in a neighborhood of La Jolla surrounded by beaches such as Wipeout, Shell, and Whispering Sands Beach.

As a result, you can book yourself a room with sea views and terraces to wake up to some fresh air. The interior is chic and cozy, making you feel at home instantly. 

Some standout amenities include a tea and coffee maker, air-conditioning, a refrigerator to store your drinks, and complimentary toiletries (in case you forgot any).

The hotel also offers complimentary bicycles, allowing you to explore your surroundings in a fun way. 

Book Your Stay Here

2. The Beau Downtown San Diego Gaslamp Quarter

Going with a more industrial vibe, the sophisticated Beau Downtown Hotel is everything you need for a thrilling stay amidst the city lights.

Located in an unbeatable location, the Gaslamp Quarter, this spot promises affordable luxury with a unique historical charm since it was first built in 1886. 

With free Wi-Fi and air conditioning throughout, the hotel offers a bespoke experience just steps away from world-famous attractions such as Petco Park and the Gaslamp Museum

There’s a secret garden to escape to if you feel like some quiet time. But if you prefer to mingle, why not order some hand-crafted cocktails from the speakeasy-inspired “The Bar at The Beau”?  

Book Your Stay Here

3. Andaz San Diego, by Hyatt

If you envision yourself on a lavish rooftop with cityscapes and an inviting pool, then you’ve just found your staymate (a play on soulmate).

And to top things off, there’s also a poolside bar and lounges on the rooftop terrace if you want to unwind with a drink or two.

Moving on to the rest of the hotel, the rooms are pristine and spacious, with street views giving you a glimpse of the vibrant nightlife. The bathrooms are just *chef’s kiss* with designer toiletries, bathrobes, and slippers.

This pet-friendly hotel has an on-site restaurant serving American cuisine and a gym to get in some stretches between sightseeing. 

Book Your Stay Here

Andaz San Diego by Hyatt
Image Credit: Expedia

4. Pendry San Diego

Pendry San Diego is not your average boutique hotel. This luxurious abode consists of three restaurants and a full-service spa.

So, if you’re not getting facials and massages, you can swim a few laps in the pool or lounge on the sundeck. Oh, and after a busy day exploring the city, your body will thank you for chilling in the hot tub. 

Each room has a unique setup with plenty of seating areas and comfortable beds drenched in Egyptian cotton. The bathrooms or ensuites are “spa-like”, with rainfall showers and elegant decor.

This hotel also has a gym, laundry facilities, room services, housekeeping, and parking.  

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5. The Pearl Hotel

Point Loma is a gorgeous beach neighborhood dotted with seafood restaurants. This is where you’ll find the Pearl Hotel, a self-proclaimed mid-century gem. 

This elegant little place with its 1960s flair is home to an oyster-shaped plunge pool and a restaurant beloved by the locals: Ponyboy. An establishment that sources its seasonal ingredients from local farms, fishermen, and ranches. 

After painting the town red, you can order some food from the on-site restaurants and enjoy free movies at the hotel’s poolside theatre afterwards. 

Grab some yummy cocktails, local beer, or wine from the on-site bar to get you in the groove for San Diego’s nightlife. 

Book Your Stay Here

The Pearl Hotel in San Diego, California
Image Credit: Booking.com

6. Twelve Senses Retreat, a Member of Design Hotels

Moving on to Encinitas, a beach town just a half-an-hour north of San Diego, is a place so enchanting that you’d want to stay there forever.

The Twelve Senses Retreat gives off a laid-back atmosphere, being a haven for relaxation. So, if you want to tour San Diego without staying in the hustle and bustle, then this place is ideal for you. 

The rooms are super stylish, with spacious walk-in showers, muted floors, and boho-chic design elements scattered throughout. The amenities are just as impressive, from free airport shuttle to yoga classes and spa treatments. 

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7. Rancho Valencia Resort and Spa

Did you know that an intimate, small resort counts as a boutique hotel? This beautiful hotel is the perfect example of one with its “rich ranch” design theme that fans of the Yellowstone TV series will appreciate.

The rooms have high wooden ceilings, cozy fireplaces, stunning dining and lounging areas, and large French windows.

Nestled in the hills of Rancho Santa Fe, it’s truly a home away from home type of place, and the amenities take it up a notch. For example, there’s a full-service spa with a sauna, hot tub, and massages. 

You can also dine at the on-site restaurants for fine cuisine in a graceful Mediterranean setting.

Spend your free time sunbathing by the gorgeous pool and lounging area, or practice your swing at the golf course (or tennis court, depending on how much relief you want). 

Book Your Stay Here

Rancho Valencia Resort and Spa
Image Credit: Booking.com

9. The Guild Hotel, a Marriott Tribute Portfolio Hotel

Now, here’s a more typical historical boutique hotel. Located in the prime downtown area, this could be the ideal home base for your adventures in San Diego. The rooms are pretty simple but very modern, with plush beds and flat-screen TVs. 

You can visit nearby attractions like the USS Midway Museum or the Maritime Museum of San Diego. The Guild Hotel is entirely laid out for your comfort and convenience, with a lounge, beauty services, a fitness room, free bicycles, and a mini market.

You can visit the on-site restaurant for a romantic evening or swing by the bar for a delicious cocktail.    

Book Your Stay Here

10. Moxy San Diego Gaslamp Quarter

For an artsy and quirky atmosphere, you 100% have to consider staying at Moxy. The hotel has so much personality and pops of color, making it super Instagrammable.

And it’s located in the buzzing Gaslamp Quarter neighborhood, so plenty of fun awaits. 

The rooms, though small, are stylish and cozy, with some amazing city views. The spacious lounge and bar area makes up for the small rooms with fashionable decor and playful touches, like the Anime-themed murals.  

Amenities range from a fitness center to an onsite restaurant and Wi-Fi throughout the property. 

Book Your Stay Here

Moxy San Diego Gaslamp Quarter
Image Credit: Booking.com

Tips for Booking Your San Diego Boutique Hotel

Already have a hotel in mind? Have a look at these practical tips before you book your boutique hotel in San Diego.

  • Book well in advance: Boutique hotels are smaller than regular ones, so they fill up much quicker. You’ll want to try to book your stay well in advance to secure your spot and also save money. 
  • Book during the off-season: If you want to score some great deals on hotels, you can save some money by visiting San Diego in the off-season. San Diego’s off-season is typically from mid-September to November. 
  • Look out for package deals: If you’re traveling on a tight budget, you can save on hotels by looking for package deals that include meals, parking, and other amenities. 

San Diego Boutique Hotels: FAQs

Here are some common FAQs relating to hotels in San Diego. 

Which Area in San Diego Is Best to Stay in?

Downtown areas like Gaslamp Quarter, Little Italy and North Park are wonderful for first-timers who want to be central to everything. Then coastal areas like Coronado, Encinitas, and Carlsbad offer a relaxing escape ideal for families. 

Are Boutique Hotels Better Than Hotels?

Boutique hotels are better at making your stay feel special and personalized. They pay attention to detail, often highlighting local culture and community. Larger chain hotels prioritize profits more but do offer a wider array of amenities. 

Is it Safe to Walk in San Diego at Night?

In general, San Diego has a safe and friendly vibe. However, solo travelers, especially women, need to take precautions when walking alone at night and should try to avoid it altogether. Stick to well-lit main streets and touristy areas.  

Do You Need a Car in San Diego?

Sure, renting a car would be convenient, but you don’t need one to get around, especially in the city center and areas with good public transit. You can use the San Diego Metropolitan Transit System (MTS) or Uber to get around without a car. 

How Many Days Do You Need in San Diego?

Try to spend at least three days in San Diego and stay longer if possible. There’s simply too much to see and do, from the foodie scene to outdoor adventures. 

Next up: Try out these awesome hikes in San Diego County. 

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